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Data set used for training
The positive training set (experimentally verified fungal effectors) that was used for training EffectorP 1.0 can be found here: Fungal effector FASTA file.
The positive training set (experimentally verified fungal effectors) that was used for training EffectorP 2.0 can be found here: Fungal effector FASTA file.
The validation set (experimentally verified fungal effectors) that was used for testing EffectorP 2.0 can be found here: Fungal effector FASTA file.
Data set used for validation of EffectorP 2.0
The set of 24,432 fungal saprophyte secreted proteins: FASTA file.
The set of 2,631 fungal, plant and mammalian proteins with signal peptides: FASTA file.
The set of 938 fungal proteins with unaffected pathogenicity phenotype: FASTA file.
The combined set of effector candidates from expression data sets of early infection: FASTA file.
Contact
For comments and suggestions regarding the effector training set please contact jana.sperschneider@csiro.au